General skillSoftware development

genie-code-omop

Build and validate OMOP CDM workflows in Databricks

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0
Forks
0
License
MIT
Updated
Updated May 7, 2026

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Project overview

This Databricks skill turns an EHR-derived Unity Catalog bronze layer into an OMOP CDM v5.4 Asset Bundle project. It generates per-table YAML transform configurations through a conversational flow, validates them with Pydantic, scaffolds jobs and data-processing files, and runs five OHDSI checks for schema, primary keys, concept foreign keys, domain conformance, and NOT NULL completeness. It validates 20 tables and auto-builds templates for 14.

Repository facts

Primary language
Python
License
MIT
Repository updated
May 7, 2026
Default branch
main

Resource types

General skill

Use cases

Software development

Platforms

Claude Code, Codex, and more

Capabilities

Verification and evals

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