Project overview
pubmed-reference-resolver extracts References sections from PDF, DOCX, or TXT files, resolves citations against PubMed, and writes a PubMed-compatible CSV, numbered abstract text, integrated audit report, and journal-mismatch JSON sidecar. It handles common citation styles, PDF line-number noise, an offline MDPI fast path, unresolved-reference preservation, composite-key deduplication, and possible fabricated-citation detection. Python 3.11+, Anthropic, and NCBI credentials are required.
Repository facts
- Primary language
- Python
- License
- MIT
- Repository updated
- Jun 8, 2026
- Default branch
- main
Resource types
CLI app
Use cases
Document productivity
Protocols & integrations
REST
Capabilities
Verification and evals